Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Gm45058-201ENSMUST00000205810 766 ntBASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Gm10175-202ENSMUST00000208752 441 ntBASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chmp2aQ9DB34 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp2aQ9DB34 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp2aQ9DB34 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp2aQ9DB34 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.52■□□□□ 0.39
Chmp2aQ9DB34 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Chmp2aQ9DB34 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp2aQ9DB34 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chmp2aQ9DB34 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Chmp2aQ9DB34 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Chmp2aQ9DB34 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chmp2aQ9DB34 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Gm7213-201ENSMUST00000215977 950 ntBASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chmp2aQ9DB34 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chmp2aQ9DB34 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 55.9 ms