Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Gtf3c6Q9D8P7 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gtf3c6Q9D8P7 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.89■□□□□ 0.46
Gtf3c6Q9D8P7 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Gtf3c6Q9D8P7 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Gtf3c6Q9D8P7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Gtf3c6Q9D8P7 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Gm5417-201ENSMUST00000079706 384 ntBASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Gtf3c6Q9D8P7 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Gtf3c6Q9D8P7 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Gtf3c6Q9D8P7 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf3c6Q9D8P7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf3c6Q9D8P7 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gtf3c6Q9D8P7 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Gtf3c6Q9D8P7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
Gtf3c6Q9D8P7 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.85■□□□□ 0.45
Gtf3c6Q9D8P7 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms