Protein–RNA interactions for Protein: Q9D7V1

Sh2d4a, SH2 domain-containing protein 4A, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh2d4aQ9D7V1 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2d4aQ9D7V1 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Sh2d4aQ9D7V1 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Sh2d4aQ9D7V1 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Gm11249-201ENSMUST00000117071 859 ntBASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Sh2d4aQ9D7V1 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Sh2d4aQ9D7V1 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2d4aQ9D7V1 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2d4aQ9D7V1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2d4aQ9D7V1 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2d4aQ9D7V1 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Sh2d4aQ9D7V1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Sh2d4aQ9D7V1 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Gm12896-201ENSMUST00000118430 226 ntBASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Aste1-202ENSMUST00000123807 2349 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Sh2d4aQ9D7V1 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Sh2d4aQ9D7V1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Sh2d4aQ9D7V1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms