Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Ric1-201ENSMUST00000043610 7190 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Gm7712-202ENSMUST00000222331 1510 ntBASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Chmp4cQ9D7F7 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Mir1199-201ENSMUST00000117015 119 ntBASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Gm27011-201ENSMUST00000182352 972 ntBASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Chmp4cQ9D7F7 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Chmp4cQ9D7F7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp4cQ9D7F7 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp4cQ9D7F7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp4cQ9D7F7 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp4cQ9D7F7 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp4cQ9D7F7 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp4cQ9D7F7 Gm28265-201ENSMUST00000188201 2319 ntBASIC20.02■□□□□ 0.8
Chmp4cQ9D7F7 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Chmp4cQ9D7F7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp4cQ9D7F7 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp4cQ9D7F7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.79
Chmp4cQ9D7F7 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Gm20760-201ENSMUST00000179197 648 ntBASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Chmp4cQ9D7F7 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Chmp4cQ9D7F7 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms