Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 H2-K2-201ENSMUST00000174250 1049 ntBASIC18.2■□□□□ 0.5
Ssr1Q9CY50 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ssr1Q9CY50 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Gm10517-202ENSMUST00000192970 758 ntBASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Gm4974-201ENSMUST00000209974 875 ntBASIC18.19■□□□□ 0.5
Ssr1Q9CY50 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ssr1Q9CY50 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Gm16401-202ENSMUST00000197463 2074 ntBASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Gm12527-201ENSMUST00000117967 564 ntBASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Gm29257-201ENSMUST00000186115 639 ntBASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ssr1Q9CY50 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Gm9694-201ENSMUST00000193347 1189 ntBASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.17■□□□□ 0.5
Ssr1Q9CY50 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC18.17■□□□□ 0.5
Ssr1Q9CY50 AC135637.1-201ENSMUST00000227750 365 ntBASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ssr1Q9CY50 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Gm43183-201ENSMUST00000200632 547 ntBASIC18.16■□□□□ 0.5
Ssr1Q9CY50 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Ssr1Q9CY50 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms