Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Gm9988-201ENSMUST00000069786 435 ntBASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
RTRAFQ9CQE8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTRAFQ9CQE8 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
RTRAFQ9CQE8 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
RTRAFQ9CQE8 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC13.71□□□□□ -0.22
RTRAFQ9CQE8 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Nodal-201ENSMUST00000049339 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.7□□□□□ -0.22
RTRAFQ9CQE8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Gm43034-201ENSMUST00000198678 1364 ntBASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RTRAFQ9CQE8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Gm13146-201ENSMUST00000118508 780 ntBASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Gm12821-201ENSMUST00000120022 600 ntBASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Gm13534-201ENSMUST00000121169 513 ntBASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Gm43060-201ENSMUST00000200621 289 ntBASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RTRAFQ9CQE8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 46.6 ms