Protein–RNA interactions for Protein: Q9CQ70

H2afb1, Histone H2A-Bbd type 1, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb1Q9CQ70 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
H2afb1Q9CQ70 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Gm29257-201ENSMUST00000186115 639 ntBASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
H2afb1Q9CQ70 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb1Q9CQ70 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb1Q9CQ70 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb1Q9CQ70 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
H2afb1Q9CQ70 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Gm18958-201ENSMUST00000174258 762 ntBASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 AC156016.1-201ENSMUST00000227190 1035 ntBASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Odf3b-204ENSMUST00000227834 930 ntBASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Gm37812-201ENSMUST00000195216 2475 ntBASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
H2afb1Q9CQ70 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
H2afb1Q9CQ70 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb1Q9CQ70 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb1Q9CQ70 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC13.68□□□□□ -0.22
H2afb1Q9CQ70 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
H2afb1Q9CQ70 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.68□□□□□ -0.22
H2afb1Q9CQ70 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms