Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh23Q99PF4 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Cdh23Q99PF4 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
Cdh23Q99PF4 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Gm4913-201ENSMUST00000117075 1290 ntBASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Gm6184-201ENSMUST00000120403 1261 ntBASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Stum-205ENSMUST00000211561 1063 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cdh23Q99PF4 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Gm11780-201ENSMUST00000136880 516 ntBASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Gm7506-201ENSMUST00000207758 815 ntBASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cdh23Q99PF4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cdh23Q99PF4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cdh23Q99PF4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cdh23Q99PF4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms