Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gtf2ird2Q99NI3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Gm5587-201ENSMUST00000206270 674 ntBASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gtf2ird2Q99NI3 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Gm6345-202ENSMUST00000180900 204 ntBASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gtf2ird2Q99NI3 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gtf2ird2Q99NI3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Gtf2ird2Q99NI3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gtf2ird2Q99NI3 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gtf2ird2Q99NI3 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gtf2ird2Q99NI3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms