Protein–RNA interactions for Protein: Q99MQ5

Col25a1, Collagen alpha-1(XXV) chain, mousemouse

Predictions only

Length 666 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col25a1Q99MQ5 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col25a1Q99MQ5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Gm20949-201ENSMUST00000206478 952 ntBASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Col25a1Q99MQ5 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Gm11025-201ENSMUST00000140773 466 ntBASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Col25a1Q99MQ5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Col25a1Q99MQ5 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.37
Col25a1Q99MQ5 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Col25a1Q99MQ5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Col25a1Q99MQ5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Gm14127-201ENSMUST00000117906 678 ntBASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Gm8969-201ENSMUST00000199694 526 ntBASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Col25a1Q99MQ5 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col25a1Q99MQ5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 AA543401-201ENSMUST00000164248 1269 ntBASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Gm37025-201ENSMUST00000195159 829 ntBASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col25a1Q99MQ5 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms