Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Gm19721-201ENSMUST00000195284 1764 ntBASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf111Q99ML9 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rnf111Q99ML9 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf111Q99ML9 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf111Q99ML9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf111Q99ML9 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf111Q99ML9 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf111Q99ML9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf111Q99ML9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf111Q99ML9 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf111Q99ML9 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.27■□□□□ 0.19
Rnf111Q99ML9 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf111Q99ML9 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rnf111Q99ML9 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Rnf111Q99ML9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Rnf111Q99ML9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms