Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18■□□□□ 0.47
Tlr3Q99MB1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Gm6728-201ENSMUST00000178117 1065 ntBASIC18■□□□□ 0.47
Tlr3Q99MB1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
Tlr3Q99MB1 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Tlr3Q99MB1 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC18■□□□□ 0.47
Tlr3Q99MB1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Tlr3Q99MB1 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Gm7370-201ENSMUST00000219471 767 ntBASIC17.99■□□□□ 0.47
Tlr3Q99MB1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.99■□□□□ 0.47
Tlr3Q99MB1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Gm16061-201ENSMUST00000122167 857 ntBASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Gm13474-201ENSMUST00000122466 815 ntBASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Tlr3Q99MB1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Tlr3Q99MB1 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.96■□□□□ 0.47
Tlr3Q99MB1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Tlr3Q99MB1 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tlr3Q99MB1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC17.96■□□□□ 0.47
Tlr3Q99MB1 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tlr3Q99MB1 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Tlr3Q99MB1 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Tlr3Q99MB1 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.46
Tlr3Q99MB1 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tlr3Q99MB1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tlr3Q99MB1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Tlr3Q99MB1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Gm10013-201ENSMUST00000106074 672 ntBASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Gm23634-201ENSMUST00000175071 91 ntBASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Tlr3Q99MB1 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms