Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Cstf1Q99LC2 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Gm19439-201ENSMUST00000198195 2273 ntBASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.71■□□□□ 0.27
Cstf1Q99LC2 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Cstf1Q99LC2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
Cstf1Q99LC2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Cstf1Q99LC2 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Gm43332-201ENSMUST00000202511 1044 ntBASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Gm6296-201ENSMUST00000222599 943 ntBASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Cstf1Q99LC2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Cstf1Q99LC2 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Gm5364-201ENSMUST00000216789 889 ntBASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Cstf1Q99LC2 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms