Protein–RNA interactions for Protein: Q99JY4

Trabd, TraB domain-containing protein, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TrabdQ99JY4 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Gm29707-201ENSMUST00000196325 491 ntBASIC17.44■□□□□ 0.38
TrabdQ99JY4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Gm43808-201ENSMUST00000202534 2065 ntBASIC17.44■□□□□ 0.38
TrabdQ99JY4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TrabdQ99JY4 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TrabdQ99JY4 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TrabdQ99JY4 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TrabdQ99JY4 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.42■□□□□ 0.38
TrabdQ99JY4 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.42■□□□□ 0.38
TrabdQ99JY4 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
TrabdQ99JY4 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Gm44450-201ENSMUST00000199528 114 ntBASIC17.41■□□□□ 0.38
TrabdQ99JY4 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TrabdQ99JY4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.4■□□□□ 0.38
TrabdQ99JY4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Gm18669-201ENSMUST00000216049 778 ntBASIC17.4■□□□□ 0.38
TrabdQ99JY4 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.4■□□□□ 0.38
TrabdQ99JY4 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.4■□□□□ 0.38
TrabdQ99JY4 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TrabdQ99JY4 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
TrabdQ99JY4 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
TrabdQ99JY4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TrabdQ99JY4 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TrabdQ99JY4 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Mir3081-201ENSMUST00000175305 84 ntBASIC17.39■□□□□ 0.37
TrabdQ99JY4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Gm18421-201ENSMUST00000204122 625 ntBASIC17.39■□□□□ 0.37
TrabdQ99JY4 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TrabdQ99JY4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms