Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Cdk9Q99J95 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Gm6211-202ENSMUST00000167849 925 ntBASIC16.92■□□□□ 0.3
Cdk9Q99J95 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 CT025689.6-201ENSMUST00000224991 1104 ntBASIC16.92■□□□□ 0.3
Cdk9Q99J95 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Flg-201ENSMUST00000050758 1488 ntBASIC16.92■□□□□ 0.3
Cdk9Q99J95 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Cdk9Q99J95 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Mir2861-201ENSMUST00000175539 82 ntBASIC16.91■□□□□ 0.3
Cdk9Q99J95 Wnt10b-205ENSMUST00000226846 1204 ntBASIC16.91■□□□□ 0.3
Cdk9Q99J95 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Cdk9Q99J95 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Gm13401-201ENSMUST00000117074 291 ntBASIC16.9■□□□□ 0.3
Cdk9Q99J95 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Cdk9Q99J95 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Gm13148-201ENSMUST00000118892 745 ntBASIC16.89■□□□□ 0.29
Cdk9Q99J95 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Gm44549-201ENSMUST00000208351 577 ntBASIC16.89■□□□□ 0.29
Cdk9Q99J95 AC153526.5-201ENSMUST00000218661 2147 ntBASIC16.89■□□□□ 0.29
Cdk9Q99J95 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Cdk9Q99J95 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms