Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rfc4Q99J62 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.28■□□□□ 0.68
Rfc4Q99J62 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Gm18421-201ENSMUST00000204122 625 ntBASIC19.28■□□□□ 0.68
Rfc4Q99J62 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC19.28■□□□□ 0.68
Rfc4Q99J62 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.28■□□□□ 0.68
Rfc4Q99J62 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rfc4Q99J62 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Rfc4Q99J62 AC125311.2-201ENSMUST00000227477 1940 ntBASIC19.27■□□□□ 0.68
Rfc4Q99J62 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Gm13312-201ENSMUST00000119631 718 ntBASIC19.27■□□□□ 0.68
Rfc4Q99J62 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc4Q99J62 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC19.27■□□□□ 0.68
Rfc4Q99J62 Gm2651-201ENSMUST00000203560 838 ntBASIC19.27■□□□□ 0.68
Rfc4Q99J62 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC19.27■□□□□ 0.68
Rfc4Q99J62 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rfc4Q99J62 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rfc4Q99J62 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfc4Q99J62 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfc4Q99J62 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfc4Q99J62 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rfc4Q99J62 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rfc4Q99J62 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Gm27525-201ENSMUST00000184465 107 ntBASIC19.25■□□□□ 0.67
Rfc4Q99J62 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Rfc4Q99J62 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rfc4Q99J62 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Gm6376-201ENSMUST00000209407 580 ntBASIC19.24■□□□□ 0.67
Rfc4Q99J62 Cmtm5-203ENSMUST00000227441 610 ntBASIC19.24■□□□□ 0.67
Rfc4Q99J62 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC19.24■□□□□ 0.67
Rfc4Q99J62 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rfc4Q99J62 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms