Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Col20a1Q923P0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Gm19439-201ENSMUST00000198195 2273 ntBASIC19.77■□□□□ 0.76
Col20a1Q923P0 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.76
Col20a1Q923P0 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col20a1Q923P0 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Col20a1Q923P0 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC19.76■□□□□ 0.75
Col20a1Q923P0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.76■□□□□ 0.75
Col20a1Q923P0 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.76■□□□□ 0.75
Col20a1Q923P0 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Col20a1Q923P0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Col20a1Q923P0 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.76■□□□□ 0.75
Col20a1Q923P0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Col20a1Q923P0 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC19.75■□□□□ 0.75
Col20a1Q923P0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.75■□□□□ 0.75
Col20a1Q923P0 AC124569.2-201ENSMUST00000225998 818 ntBASIC19.75■□□□□ 0.75
Col20a1Q923P0 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.75■□□□□ 0.75
Col20a1Q923P0 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Col20a1Q923P0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.73■□□□□ 0.75
Col20a1Q923P0 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.73■□□□□ 0.75
Col20a1Q923P0 AC122335.2-201ENSMUST00000213901 6181 ntBASIC19.73■□□□□ 0.75
Col20a1Q923P0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Gm10052-201ENSMUST00000168019 960 ntBASIC19.73■□□□□ 0.75
Col20a1Q923P0 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Col20a1Q923P0 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.73■□□□□ 0.75
Col20a1Q923P0 Gm7729-201ENSMUST00000050143 801 ntBASIC19.73■□□□□ 0.75
Col20a1Q923P0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Col20a1Q923P0 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Col20a1Q923P0 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col20a1Q923P0 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Col20a1Q923P0 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms