Protein–RNA interactions for Protein: Q91Y00

Pcdhb2, Protocadherin beta 2, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb2Q91Y00 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhb2Q91Y00 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Gm11355-201ENSMUST00000121120 306 ntBASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Gm10566-201ENSMUST00000086739 996 ntBASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhb2Q91Y00 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Gm25016-201ENSMUST00000158399 131 ntBASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhb2Q91Y00 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pcdhb2Q91Y00 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pcdhb2Q91Y00 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pcdhb2Q91Y00 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms