Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Pcdhb5Q91XZ5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Gm13312-201ENSMUST00000119631 718 ntBASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Gm11452-201ENSMUST00000122376 690 ntBASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Gm10052-201ENSMUST00000168019 960 ntBASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Gm7729-201ENSMUST00000050143 801 ntBASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Zcchc6-207ENSMUST00000225576 2499 ntBASIC19.73■□□□□ 0.75
Pcdhb5Q91XZ5 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Gm12644-201ENSMUST00000119935 606 ntBASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Gm45203-201ENSMUST00000206384 1831 ntBASIC19.72■□□□□ 0.75
Pcdhb5Q91XZ5 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Gm43808-201ENSMUST00000202534 2065 ntBASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC19.71■□□□□ 0.75
Pcdhb5Q91XZ5 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pcdhb5Q91XZ5 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pcdhb5Q91XZ5 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms