Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Gm37025-201ENSMUST00000195159 829 ntBASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Timm23-208ENSMUST00000226683 750 ntBASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Pcdhga3Q91XY5 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Gm715-201ENSMUST00000117865 831 ntBASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Gm12085-201ENSMUST00000119263 940 ntBASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Pcdhga3Q91XY5 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 AC156016.1-201ENSMUST00000227190 1035 ntBASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Pcdhga3Q91XY5 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Gm20628-201ENSMUST00000177363 3215 ntBASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Gm38027-201ENSMUST00000192315 235 ntBASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Pcdhga3Q91XY5 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Pcdhga3Q91XY5 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms