Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trex1Q91XB0 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trex1Q91XB0 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trex1Q91XB0 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Trex1Q91XB0 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Trex1Q91XB0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Gm11452-201ENSMUST00000122376 690 ntBASIC19.18■□□□□ 0.66
Trex1Q91XB0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.18■□□□□ 0.66
Trex1Q91XB0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.18■□□□□ 0.66
Trex1Q91XB0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Trex1Q91XB0 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC19.17■□□□□ 0.66
Trex1Q91XB0 Gm12644-201ENSMUST00000119935 606 ntBASIC19.17■□□□□ 0.66
Trex1Q91XB0 Gm44430-201ENSMUST00000203376 995 ntBASIC19.17■□□□□ 0.66
Trex1Q91XB0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.17■□□□□ 0.66
Trex1Q91XB0 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Trex1Q91XB0 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Rprl3-201ENSMUST00000157400 290 ntBASIC19.16■□□□□ 0.66
Trex1Q91XB0 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Trex1Q91XB0 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Trex1Q91XB0 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Trex1Q91XB0 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Trex1Q91XB0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Gm15442-201ENSMUST00000117905 1527 ntBASIC19.14■□□□□ 0.65
Trex1Q91XB0 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Trex1Q91XB0 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Trex1Q91XB0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Trex1Q91XB0 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Trex1Q91XB0 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms