Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pcdhb11Q91UZ8 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Gm10231-201ENSMUST00000181584 441 ntBASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Gm10175-202ENSMUST00000208752 441 ntBASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Gm10566-201ENSMUST00000086739 996 ntBASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Pcdhb11Q91UZ8 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Mir1668-201ENSMUST00000184114 107 ntBASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Pcdhb11Q91UZ8 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.15■□□□□ 0.34
Pcdhb11Q91UZ8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Gm13186-201ENSMUST00000118031 316 ntBASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Gm18032-201ENSMUST00000222541 538 ntBASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Pcdhb11Q91UZ8 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Pcdhb11Q91UZ8 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms