Protein–RNA interactions for Protein: Q8VEK3

Hnrnpu, Heterogeneous nuclear ribonucleoprotein U, mousemouse

Known RBP Predictions only

Length 800 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HnrnpuQ8VEK3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HnrnpuQ8VEK3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Haglr-201ENSMUST00000100000 2085 ntBASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Gm13474-201ENSMUST00000122466 815 ntBASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HnrnpuQ8VEK3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Gm16061-201ENSMUST00000122167 857 ntBASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HnrnpuQ8VEK3 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HnrnpuQ8VEK3 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Gm11539-201ENSMUST00000119837 557 ntBASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Gm13436-201ENSMUST00000120418 567 ntBASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Gm36858-201ENSMUST00000194501 2391 ntBASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC20.83■□□□□ 0.93
HnrnpuQ8VEK3 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HnrnpuQ8VEK3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.83■□□□□ 0.92
HnrnpuQ8VEK3 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HnrnpuQ8VEK3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Gm6190-201ENSMUST00000220683 1374 ntBASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HnrnpuQ8VEK3 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms