Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Gm27405-201ENSMUST00000184201 112 ntBASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
Rpa1Q8VEE4 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Gm19430-201ENSMUST00000193847 2137 ntBASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Rpa1Q8VEE4 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rpa1Q8VEE4 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Gm11643-201ENSMUST00000119578 864 ntBASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rpa1Q8VEE4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Rpa1Q8VEE4 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Rpa1Q8VEE4 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rpa1Q8VEE4 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Gm10654-201ENSMUST00000098653 1633 ntBASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Mtag2-201ENSMUST00000058665 714 ntBASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rpa1Q8VEE4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms