Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rprd1aQ8VDS4 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Gm23634-201ENSMUST00000175071 91 ntBASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rprd1aQ8VDS4 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Gm45244-201ENSMUST00000211328 2200 ntBASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Rprd1aQ8VDS4 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Rprd1aQ8VDS4 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Gm6728-201ENSMUST00000178117 1065 ntBASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Rprd1aQ8VDS4 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 AA414768-201ENSMUST00000121924 1257 ntBASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Rprd1aQ8VDS4 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms