Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Gm15743-202ENSMUST00000182690 1901 ntBASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.29■□□□□ 0.52
Dnajc28Q8VCE1 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Gm37722-201ENSMUST00000193757 208 ntBASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Dnajc28Q8VCE1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Gm11860-201ENSMUST00000122346 1010 ntBASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Dnajc28Q8VCE1 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Dnajc28Q8VCE1 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Dnajc28Q8VCE1 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Dnajc28Q8VCE1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Gm19721-201ENSMUST00000195284 1764 ntBASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Dnajc28Q8VCE1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Mir3081-201ENSMUST00000175305 84 ntBASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Mir8112-201ENSMUST00000184382 131 ntBASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Dnajc28Q8VCE1 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Dnajc28Q8VCE1 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.3 ms