Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Gm18115-201ENSMUST00000221209 621 ntBASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rpap2Q8VC34 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Rpap2Q8VC34 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.39■□□□□ 0.54
Rpap2Q8VC34 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 AC134329.2-201ENSMUST00000217897 428 ntBASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rpap2Q8VC34 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Gm26039-201ENSMUST00000158152 144 ntBASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Cxcl14-202ENSMUST00000224801 1467 ntBASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rpap2Q8VC34 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rpap2Q8VC34 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rpap2Q8VC34 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms