Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Sh3kbp1Q8R550 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Gm14859-201ENSMUST00000117752 357 ntBASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Gm25016-201ENSMUST00000158399 131 ntBASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Il3ra-202ENSMUST00000223589 738 ntBASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Sh3kbp1Q8R550 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Sh3kbp1Q8R550 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Gm7284-201ENSMUST00000131667 944 ntBASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Gm27389-201ENSMUST00000183622 195 ntBASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Sh3kbp1Q8R550 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3kbp1Q8R550 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3kbp1Q8R550 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3kbp1Q8R550 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
Sh3kbp1Q8R550 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Sh3kbp1Q8R550 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Mir1668-201ENSMUST00000184114 107 ntBASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Gm7213-201ENSMUST00000215977 950 ntBASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Sh3kbp1Q8R550 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Gm9103-201ENSMUST00000119371 405 ntBASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Gm27741-201ENSMUST00000185060 237 ntBASIC17.25■□□□□ 0.35
Sh3kbp1Q8R550 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms