Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC20.06■□□□□ 0.8
Top1mtQ8R4U6 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Top1mtQ8R4U6 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Gm15565-201ENSMUST00000118890 427 ntBASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Gm16061-201ENSMUST00000122167 857 ntBASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Gm43799-201ENSMUST00000201845 579 ntBASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Top1mtQ8R4U6 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Mir6982-201ENSMUST00000184354 68 ntBASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 AC159205.6-201ENSMUST00000224935 887 ntBASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Gm15743-202ENSMUST00000182690 1901 ntBASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Top1mtQ8R4U6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Spsb2-203ENSMUST00000112473 1322 ntBASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Top1mtQ8R4U6 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.79
Top1mtQ8R4U6 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Top1mtQ8R4U6 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Top1mtQ8R4U6 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
Top1mtQ8R4U6 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Top1mtQ8R4U6 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.02■□□□□ 0.79
Top1mtQ8R4U6 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Top1mtQ8R4U6 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Gm13474-201ENSMUST00000122466 815 ntBASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC20.01■□□□□ 0.79
Top1mtQ8R4U6 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Top1mtQ8R4U6 Gm43548-201ENSMUST00000197139 2353 ntBASIC20■□□□□ 0.79
Top1mtQ8R4U6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Top1mtQ8R4U6 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Top1mtQ8R4U6 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Top1mtQ8R4U6 Gm13186-201ENSMUST00000118031 316 ntBASIC20■□□□□ 0.79
Top1mtQ8R4U6 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC20■□□□□ 0.79
Top1mtQ8R4U6 Gm7889-201ENSMUST00000185591 958 ntBASIC20■□□□□ 0.79
Top1mtQ8R4U6 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Top1mtQ8R4U6 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Top1mtQ8R4U6 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC20■□□□□ 0.79
Top1mtQ8R4U6 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms