Protein–RNA interactions for Protein: Q8R4P5

Tmc1, Transmembrane channel-like protein 1, mousemouse

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmc1Q8R4P5 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Gm15375-201ENSMUST00000119510 849 ntBASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
Tmc1Q8R4P5 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 AL672049.1-201ENSMUST00000197943 91 ntBASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tmc1Q8R4P5 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmc1Q8R4P5 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmc1Q8R4P5 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmc1Q8R4P5 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tmc1Q8R4P5 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tmc1Q8R4P5 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tmc1Q8R4P5 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Tmc1Q8R4P5 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tmc1Q8R4P5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC20.52■□□□□ 0.87
Tmc1Q8R4P5 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
Tmc1Q8R4P5 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Mir1199-201ENSMUST00000117015 119 ntBASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tmc1Q8R4P5 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Gm19430-201ENSMUST00000193847 2137 ntBASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tmc1Q8R4P5 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmc1Q8R4P5 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tmc1Q8R4P5 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmc1Q8R4P5 AC133083.1-201ENSMUST00000221736 2209 ntBASIC20.49■□□□□ 0.87
Tmc1Q8R4P5 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmc1Q8R4P5 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmc1Q8R4P5 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tmc1Q8R4P5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC20.49■□□□□ 0.87
Tmc1Q8R4P5 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms