Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chrna3Q8R4G9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Gm8258-201ENSMUST00000055593 1449 ntBASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chrna3Q8R4G9 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Gm5587-201ENSMUST00000206270 674 ntBASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chrna3Q8R4G9 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Ddx41-204ENSMUST00000224765 2199 ntBASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Chrna3Q8R4G9 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 AC122351.1-201ENSMUST00000220467 126 ntBASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.44■□□□□ 0.22
Chrna3Q8R4G9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Chrna3Q8R4G9 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms