Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pspc1Q8R326 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC19.27■□□□□ 0.68
Pspc1Q8R326 Gm6190-201ENSMUST00000220683 1374 ntBASIC19.27■□□□□ 0.68
Pspc1Q8R326 Wnt10b-204ENSMUST00000226655 1807 ntBASIC19.27■□□□□ 0.68
Pspc1Q8R326 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Pspc1Q8R326 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Pspc1Q8R326 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pspc1Q8R326 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC19.26■□□□□ 0.67
Pspc1Q8R326 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC19.25■□□□□ 0.67
Pspc1Q8R326 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.25■□□□□ 0.67
Pspc1Q8R326 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Pspc1Q8R326 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Gm7153-201ENSMUST00000117092 455 ntBASIC19.24■□□□□ 0.67
Pspc1Q8R326 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Umpk-ps-201ENSMUST00000211897 827 ntBASIC19.24■□□□□ 0.67
Pspc1Q8R326 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pspc1Q8R326 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pspc1Q8R326 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pspc1Q8R326 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pspc1Q8R326 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pspc1Q8R326 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pspc1Q8R326 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pspc1Q8R326 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pspc1Q8R326 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Pspc1Q8R326 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Pspc1Q8R326 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pspc1Q8R326 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pspc1Q8R326 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pspc1Q8R326 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pspc1Q8R326 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pspc1Q8R326 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms