Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Rfc3Q8R323 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Gm7213-201ENSMUST00000215977 950 ntBASIC15.49■□□□□ 0.07
Rfc3Q8R323 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.49■□□□□ 0.07
Rfc3Q8R323 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Rfc3Q8R323 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Mir8112-201ENSMUST00000184382 131 ntBASIC15.48■□□□□ 0.07
Rfc3Q8R323 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.48■□□□□ 0.07
Rfc3Q8R323 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Rfc3Q8R323 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.47■□□□□ 0.07
Rfc3Q8R323 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Gm10459-201ENSMUST00000202708 1155 ntBASIC15.47■□□□□ 0.07
Rfc3Q8R323 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Gm21559-201ENSMUST00000220638 855 ntBASIC15.47■□□□□ 0.07
Rfc3Q8R323 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Gm8587-201ENSMUST00000076538 843 ntBASIC15.47■□□□□ 0.07
Rfc3Q8R323 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Rfc3Q8R323 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.46■□□□□ 0.07
Rfc3Q8R323 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Gm17661-201ENSMUST00000170317 270 ntBASIC15.46■□□□□ 0.07
Rfc3Q8R323 Gm27389-201ENSMUST00000183622 195 ntBASIC15.46■□□□□ 0.07
Rfc3Q8R323 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Rfc3Q8R323 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC15.46■□□□□ 0.06
Rfc3Q8R323 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rfc3Q8R323 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Rfc3Q8R323 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
Rfc3Q8R323 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc3Q8R323 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Rfc3Q8R323 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc3Q8R323 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc3Q8R323 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Rfc3Q8R323 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 124.6 ms