Protein–RNA interactions for Protein: Q8R2I0

Foxe1, Forkhead box protein E1, mousemouse

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxe1Q8R2I0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Gm13418-201ENSMUST00000119097 944 ntBASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 AV026068-213ENSMUST00000223675 1171 ntBASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Foxe1Q8R2I0 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Foxe1Q8R2I0 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Foxe1Q8R2I0 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Gm44430-201ENSMUST00000203376 995 ntBASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Foxe1Q8R2I0 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Foxe1Q8R2I0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms