Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Gm11452-201ENSMUST00000122376 690 ntBASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Gm6598-201ENSMUST00000202719 2615 ntBASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Vopp1Q8R1C3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Gm45606-201ENSMUST00000209836 2795 ntBASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Gm36967-201ENSMUST00000193814 266 ntBASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Vopp1Q8R1C3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Vopp1Q8R1C3 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Gm8349-201ENSMUST00000182720 1003 ntBASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Vopp1Q8R1C3 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Vopp1Q8R1C3 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Vopp1Q8R1C3 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms