Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ebf4Q8K4J2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Zfp783-201ENSMUST00000095946 670 ntBASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Ebf4Q8K4J2 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf4Q8K4J2 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf4Q8K4J2 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf4Q8K4J2 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Ebf4Q8K4J2 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
Ebf4Q8K4J2 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Ebf4Q8K4J2 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Gm42778-201ENSMUST00000199644 553 ntBASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ebf4Q8K4J2 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Gm44616-201ENSMUST00000206417 1732 ntBASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ebf4Q8K4J2 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ebf4Q8K4J2 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms