Protein–RNA interactions for Protein: Q8K3F2

Mmp21, Matrix metalloproteinase-21, mousemouse

Predictions only

Length 568 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp21Q8K3F2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Mmp21Q8K3F2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Ank2-226ENSMUST00000189368 339 ntBASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Mmp21Q8K3F2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Gm18421-201ENSMUST00000204122 625 ntBASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Mmp21Q8K3F2 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Mmp21Q8K3F2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Gm6598-201ENSMUST00000202719 2615 ntBASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Gm10461-201ENSMUST00000202073 4786 ntBASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Mmp21Q8K3F2 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Mmp21Q8K3F2 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms