Protein–RNA interactions for Protein: Q8CHP0

Zc3h3, Zinc finger CCCH domain-containing protein 3, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zc3h3Q8CHP0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Zc3h3Q8CHP0 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Gm43545-201ENSMUST00000196765 2779 ntBASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Zc3h3Q8CHP0 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Gm11780-201ENSMUST00000136880 516 ntBASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 AC084391.1-201ENSMUST00000200651 141 ntBASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Gm15500-202ENSMUST00000071641 1019 ntBASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Zc3h3Q8CHP0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 AC157650.3-201ENSMUST00000225058 1476 ntBASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Zc3h3Q8CHP0 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Gm7222-201ENSMUST00000117512 906 ntBASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Mir6956-201ENSMUST00000183598 62 ntBASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 AC139382.1-201ENSMUST00000221402 498 ntBASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Zc3h3Q8CHP0 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Zc3h3Q8CHP0 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms