Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip3Q8CHD8 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip3Q8CHD8 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC21.69■■□□□ 1.06
Rab11fip3Q8CHD8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip3Q8CHD8 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC21.69■■□□□ 1.06
Rab11fip3Q8CHD8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip3Q8CHD8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rab11fip3Q8CHD8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rab11fip3Q8CHD8 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip3Q8CHD8 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip3Q8CHD8 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip3Q8CHD8 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC21.68■■□□□ 1.06
Rab11fip3Q8CHD8 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip3Q8CHD8 Gfra2-202ENSMUST00000227633 1480 ntBASIC21.68■■□□□ 1.06
Rab11fip3Q8CHD8 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rab11fip3Q8CHD8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Rab11fip3Q8CHD8 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Umpk-ps-201ENSMUST00000211897 827 ntBASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rab11fip3Q8CHD8 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rab11fip3Q8CHD8 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 AC153889.1-201ENSMUST00000219257 330 ntBASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rab11fip3Q8CHD8 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rab11fip3Q8CHD8 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rab11fip3Q8CHD8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rab11fip3Q8CHD8 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rab11fip3Q8CHD8 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Gm10052-201ENSMUST00000168019 960 ntBASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Gm7729-201ENSMUST00000050143 801 ntBASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rab11fip3Q8CHD8 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Gm15372-201ENSMUST00000120729 834 ntBASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Gm44430-201ENSMUST00000203376 995 ntBASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 AC124569.2-201ENSMUST00000225998 818 ntBASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Rab11fip3Q8CHD8 Gm11620-201ENSMUST00000118770 1845 ntBASIC21.62■■□□□ 1.05
Rab11fip3Q8CHD8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Rab11fip3Q8CHD8 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC21.62■■□□□ 1.05
Rab11fip3Q8CHD8 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Rab11fip3Q8CHD8 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms