Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Mir3081-201ENSMUST00000175305 84 ntBASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Rdh1Q8CGV4 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Gm29707-201ENSMUST00000196325 491 ntBASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Gm18669-201ENSMUST00000216049 778 ntBASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rdh1Q8CGV4 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Gm27357-201ENSMUST00000183754 135 ntBASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.28■□□□□ 0.2
Rdh1Q8CGV4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Gm28033-201ENSMUST00000184224 96 ntBASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rdh1Q8CGV4 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Rdh1Q8CGV4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rdh1Q8CGV4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rdh1Q8CGV4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rdh1Q8CGV4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rdh1Q8CGV4 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Gm15794-201ENSMUST00000120182 631 ntBASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Olfr129-201ENSMUST00000122318 993 ntBASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rdh1Q8CGV4 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rdh1Q8CGV4 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms