Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.91
Smc5Q8CG46 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smc5Q8CG46 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Smc5Q8CG46 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 AC115863.1-201ENSMUST00000214815 1813 ntBASIC20.76■□□□□ 0.91
Smc5Q8CG46 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Smc5Q8CG46 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.76■□□□□ 0.91
Smc5Q8CG46 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC20.76■□□□□ 0.91
Smc5Q8CG46 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Smc5Q8CG46 AC135637.1-201ENSMUST00000227750 365 ntBASIC20.75■□□□□ 0.91
Smc5Q8CG46 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Smc5Q8CG46 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smc5Q8CG46 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Smc5Q8CG46 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smc5Q8CG46 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc5Q8CG46 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc5Q8CG46 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc5Q8CG46 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC20.73■□□□□ 0.91
Smc5Q8CG46 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc5Q8CG46 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC20.73■□□□□ 0.91
Smc5Q8CG46 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc5Q8CG46 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc5Q8CG46 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Smc5Q8CG46 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC20.73■□□□□ 0.91
Smc5Q8CG46 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Smc5Q8CG46 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Smc5Q8CG46 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Gm9954-202ENSMUST00000198686 4725 ntBASIC20.71■□□□□ 0.91
Smc5Q8CG46 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Smc5Q8CG46 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms