Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Gm21362-201ENSMUST00000194272 928 ntBASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nup88Q8CEC0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC19.78■□□□□ 0.76
Nup88Q8CEC0 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nup88Q8CEC0 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Nup88Q8CEC0 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nup88Q8CEC0 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Gm10013-201ENSMUST00000106074 672 ntBASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Gm2274-201ENSMUST00000184539 609 ntBASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nup88Q8CEC0 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nup88Q8CEC0 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Gm23634-201ENSMUST00000175071 91 ntBASIC19.73■□□□□ 0.75
Nup88Q8CEC0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Nup88Q8CEC0 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 687.1 ms