Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph6aQ8CDR2 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph6aQ8CDR2 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph6aQ8CDR2 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph6aQ8CDR2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC21.81■■□□□ 1.08
Rsph6aQ8CDR2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph6aQ8CDR2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Rsph6aQ8CDR2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 AC153794.1-201ENSMUST00000169148 126 ntBASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Rsph6aQ8CDR2 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Gm13312-201ENSMUST00000119631 718 ntBASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC21.79■■□□□ 1.08
Rsph6aQ8CDR2 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Gm15372-201ENSMUST00000120729 834 ntBASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Gm10052-201ENSMUST00000168019 960 ntBASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Gm44430-201ENSMUST00000203376 995 ntBASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Gm7729-201ENSMUST00000050143 801 ntBASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC21.78■■□□□ 1.08
Rsph6aQ8CDR2 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph6aQ8CDR2 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph6aQ8CDR2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph6aQ8CDR2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph6aQ8CDR2 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph6aQ8CDR2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC21.77■■□□□ 1.08
Rsph6aQ8CDR2 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph6aQ8CDR2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
Rsph6aQ8CDR2 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Rsph6aQ8CDR2 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Rsph6aQ8CDR2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
Rsph6aQ8CDR2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Gm27459-201ENSMUST00000184860 107 ntBASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Slc35b2-202ENSMUST00000223987 1766 ntBASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Rsph6aQ8CDR2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rsph6aQ8CDR2 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC21.75■■□□□ 1.07
Rsph6aQ8CDR2 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Rsph6aQ8CDR2 Rpl27-201ENSMUST00000077856 614 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Rsph6aQ8CDR2 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.75■■□□□ 1.07
Rsph6aQ8CDR2 Gm43702-201ENSMUST00000198772 2546 ntBASIC21.75■■□□□ 1.07
Rsph6aQ8CDR2 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms