Protein–RNA interactions for Protein: Q8CCE9

E4f1, Transcription factor E4F1, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E4f1Q8CCE9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
E4f1Q8CCE9 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
E4f1Q8CCE9 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
E4f1Q8CCE9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
E4f1Q8CCE9 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
E4f1Q8CCE9 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 AC120002.2-201ENSMUST00000220205 773 ntBASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
E4f1Q8CCE9 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
E4f1Q8CCE9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Mir8112-201ENSMUST00000184382 131 ntBASIC19.7■□□□□ 0.74
E4f1Q8CCE9 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
E4f1Q8CCE9 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Gm17971-201ENSMUST00000190239 806 ntBASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
E4f1Q8CCE9 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 CT010478.1-201ENSMUST00000220747 2787 ntBASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
E4f1Q8CCE9 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
E4f1Q8CCE9 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
E4f1Q8CCE9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
E4f1Q8CCE9 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
E4f1Q8CCE9 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.67■□□□□ 0.74
E4f1Q8CCE9 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.67■□□□□ 0.74
E4f1Q8CCE9 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
E4f1Q8CCE9 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms