Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vps53Q8CCB4 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vps53Q8CCB4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.52■□□□□ 0.71
Vps53Q8CCB4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
Vps53Q8CCB4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vps53Q8CCB4 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps53Q8CCB4 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps53Q8CCB4 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Vps53Q8CCB4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vps53Q8CCB4 AC154231.1-201ENSMUST00000220564 2175 ntBASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Gm25016-201ENSMUST00000158399 131 ntBASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Vps53Q8CCB4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vps53Q8CCB4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Gm9103-201ENSMUST00000119371 405 ntBASIC19.49■□□□□ 0.71
Vps53Q8CCB4 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Gm4974-201ENSMUST00000209974 875 ntBASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Vps53Q8CCB4 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Vps53Q8CCB4 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms