Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Alx1Q8C8B0 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Alx1Q8C8B0 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Gm33142-201ENSMUST00000193913 867 ntBASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Alx1Q8C8B0 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC19.55■□□□□ 0.72
Alx1Q8C8B0 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Gm45328-201ENSMUST00000210942 917 ntBASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Alx1Q8C8B0 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 AC159205.3-201ENSMUST00000224614 874 ntBASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Alx1Q8C8B0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Alx1Q8C8B0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Alx1Q8C8B0 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.52■□□□□ 0.71
Alx1Q8C8B0 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Alx1Q8C8B0 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Alx1Q8C8B0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Alx1Q8C8B0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms