Protein–RNA interactions for Protein: Q8C7D3

Pabpc5, Poly A binding protein, cytoplasmic 5, mousemouse

Known RBP Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpc5Q8C7D3 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
Pabpc5Q8C7D3 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.83■□□□□ 0.28
Pabpc5Q8C7D3 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpc5Q8C7D3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpc5Q8C7D3 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpc5Q8C7D3 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpc5Q8C7D3 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC16.83■□□□□ 0.28
Pabpc5Q8C7D3 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpc5Q8C7D3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Pabpc5Q8C7D3 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Gm25016-201ENSMUST00000158399 131 ntBASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Gm18958-201ENSMUST00000174258 762 ntBASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Pabpc5Q8C7D3 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Pabpc5Q8C7D3 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 AC134329.2-201ENSMUST00000217897 428 ntBASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Pabpc5Q8C7D3 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Pabpc5Q8C7D3 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms