Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Vps9d1Q8C190 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Vps9d1Q8C190 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Vps9d1Q8C190 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps9d1Q8C190 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps9d1Q8C190 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps9d1Q8C190 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Vps9d1Q8C190 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Gm5643-201ENSMUST00000117081 966 ntBASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Gm13181-201ENSMUST00000120117 1069 ntBASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Vps9d1Q8C190 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Vps9d1Q8C190 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Vps9d1Q8C190 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms