Protein–RNA interactions for Protein: Q8C0Q4

Nek11, Serine/threonine-protein kinase Nek11, mousemouse

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nek11Q8C0Q4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nek11Q8C0Q4 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nek11Q8C0Q4 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nek11Q8C0Q4 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Nek11Q8C0Q4 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Gm27389-201ENSMUST00000183622 195 ntBASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 AC121577.1-201ENSMUST00000227302 707 ntBASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Nek11Q8C0Q4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Nek11Q8C0Q4 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Nek11Q8C0Q4 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Gm10013-201ENSMUST00000106074 672 ntBASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Gm11336-201ENSMUST00000118168 334 ntBASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Nek11Q8C0Q4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Gm13836-201ENSMUST00000121159 501 ntBASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Nek11Q8C0Q4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Nek11Q8C0Q4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Nek11Q8C0Q4 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms