Protein–RNA interactions for Protein: Q8C0C4

Ccser1, Serine-rich coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccser1Q8C0C4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Ccser1Q8C0C4 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Gm11950-201ENSMUST00000121615 838 ntBASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Gm6623-201ENSMUST00000173570 544 ntBASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Gm21362-201ENSMUST00000194272 928 ntBASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ccser1Q8C0C4 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Gm7367-201ENSMUST00000057611 492 ntBASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.04■□□□□ 0.48
Ccser1Q8C0C4 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Gfra2-202ENSMUST00000227633 1480 ntBASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Gm18421-201ENSMUST00000204122 625 ntBASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Ccser1Q8C0C4 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ccser1Q8C0C4 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ccser1Q8C0C4 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Ccser1Q8C0C4 AC122335.2-201ENSMUST00000213901 6181 ntBASIC18.02■□□□□ 0.47
Ccser1Q8C0C4 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccser1Q8C0C4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccser1Q8C0C4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccser1Q8C0C4 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccser1Q8C0C4 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC18.01■□□□□ 0.47
Ccser1Q8C0C4 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccser1Q8C0C4 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC18.01■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms